Package: epidist 0.0.0.9000
epidist: Estimate Epidemiological Delay Distributions With brms
Understanding and accurately estimating epidemiological delay distributions is important for public health policy. These estimates directly influence epidemic situational awareness, control strategies, and resource allocation. In this package, we provide methods to address the key challenges in estimating these distributions, including truncation, interval censoring, and dynamical biases. Despite their importance, these issues are frequently overlooked, often resulting in biased conclusions.
Authors:
epidist_0.0.0.9000.tar.gz
epidist_0.0.0.9000.zip(r-4.5)epidist_0.0.0.9000.zip(r-4.4)epidist_0.0.0.9000.zip(r-4.3)
epidist_0.0.0.9000.tgz(r-4.4-any)epidist_0.0.0.9000.tgz(r-4.3-any)
epidist_0.0.0.9000.tar.gz(r-4.5-noble)epidist_0.0.0.9000.tar.gz(r-4.4-noble)
epidist_0.0.0.9000.tgz(r-4.4-emscripten)epidist_0.0.0.9000.tgz(r-4.3-emscripten)
epidist.pdf |epidist.html✨
epidist/json (API)
NEWS
# Install 'epidist' in R: |
install.packages('epidist', repos = c('https://epinowcast.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/epinowcast/epidist/issues
Pkgdown site:https://epidist.epinowcast.org
- sierra_leone_ebola_data - Ebola linelist data from Fang et al.
Last updated 2 months agofrom:dc5779afe5 (on v0.1.0). Checks:1 OK, 6 NOTE. Indexed: yes.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Jan 21 2025 |
R-4.5-win | NOTE | Jan 21 2025 |
R-4.5-linux | NOTE | Jan 21 2025 |
R-4.4-win | NOTE | Jan 21 2025 |
R-4.4-mac | NOTE | Jan 21 2025 |
R-4.3-win | NOTE | Jan 21 2025 |
R-4.3-mac | NOTE | Jan 21 2025 |
Exports:add_mean_sdas_epidist_latent_modelas_epidist_linelist_dataas_epidist_naive_modelassert_epidistbfepidistepidist_diagnosticsepidist_familyepidist_family_modelepidist_family_priorepidist_family_reparamepidist_formulaepidist_formula_modelepidist_gen_posterior_epredepidist_gen_posterior_predictepidist_model_priorepidist_priorepidist_stancodeGammais_epidist_latent_modelis_epidist_linelist_datais_epidist_naive_modellognormalnew_epidist_latent_modelnew_epidist_linelist_datanew_epidist_naive_modelpredict_delay_parameterspredict_dparsimulate_exponential_casessimulate_gillespiesimulate_secondarysimulate_uniform_casesweibull
Dependencies:abindbackportsbayesplotBHbridgesamplingbrmsBrobdingnagcallrcheckmateclicodacodetoolscolorspacecpp11descdigestdistributionaldplyrfansifarverfuturefuture.applygenericsggplot2ggridgesglobalsgluegridExtragtableinlineisobandlabelinglatticelifecyclelistenvloolubridatemagrittrMASSMatrixmatrixStatsmgcvmunsellmvtnormnleqslvnlmenumDerivparallellypillarpkgbuildpkgconfigplyrposteriorpracmaprimarycensoredprocessxpspurrrQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelreshape2rlangrstanrstantoolsscalesStanHeadersstringistringrtensorAtibbletidyselecttimechangeutf8vctrsviridisLitewithr